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ABOUT THIS RECORD
ID:
MNEST046710
species:
Raphanus raphanistrum subsp raphanistrum
source:
microPC, original name:
miR319
SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGGGAGCTC
miRNA*
GCTCCTTATAGTTCAAAC
mismatches:
1
bulges:
0
View larger
pre-miRNA
GG
GCTCCTTATAGTTCAAAC
GAGAGTTTAGCGGGGTAAAGAAAAGCTGCTAAGCTATGGATACCATAAGCCCTAATCCTTGTATTGAAAAAGGACTTGGT
AATATGGCTTGCATATCTCAGGAGCTTTAACTTACCCTTTAATTGCTTTTACTCTTCT
TTGGATTGAAGGGAGCTC
dot-bracket secondary structure
((
(((((((.(((((((((.
((((((..((((((((((...((((((.((.((.((((.(..(((((...((...(((((.........)))))...)).
..)))))..).)))).)).)).))))))...)))))))......)))...)))))).)
)))))))).)))))))))
SIMILARITIES
miRBase
bra-MIR159a
:
3e-73
PMRD
bra-miR159a
:
3e-73
microPC
miR159
:
4e-97
UniProt
no hits
RFAM
MIR159: 3e-58
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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