miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST046710
species: Raphanus raphanistrum subsp raphanistrum
source: microPC, original name: miR319







SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGGGAGCTC

miRNA*
GCTCCTTATAGTTCAAAC

mismatches: 1
bulges: 0

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pre-miRNA
GGGCTCCTTATAGTTCAAACGAGAGTTTAGCGGGGTAAAGAAAAGCTGCTAAGCTATGGATACCATAAGCCCTAATCCTTGTATTGAAAAAGGACTTGGT
AATATGGCTTGCATATCTCAGGAGCTTTAACTTACCCTTTAATTGCTTTTACTCTTCTTTGGATTGAAGGGAGCTC


dot-bracket secondary structure
(((((((((.(((((((((.((((((..((((((((((...((((((.((.((.((((.(..(((((...((...(((((.........)))))...)).
..)))))..).)))).)).)).))))))...)))))))......)))...)))))).))))))))).)))))))))



SIMILARITIES
miRBase bra-MIR159a: 3e-73

PMRD bra-miR159a: 3e-73

microPC miR159: 4e-97
UniProt no hits

RFAM MIR159: 3e-58

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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