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ABOUT THIS RECORD
ID:
MNEST046748
species:
Oryza sativa
source:
microPC, original name:
miR806
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
ATGTGCTAAAAAGTCAATGGTG
miRNA*
CTATTGATCTTTTAACACATGT
mismatches:
3
bulges:
0
View larger
pre-miRNA
TA
CTATTGATCTTTTAACACATGT
TTGACCGTTCATCTTATTCAAAAACTTTTGTAAAATATGTAAAACTATACGTATGCATAAAAGTATATTTAACAAT
GAATCAAATTATAGGAAAAAAAATAATAATTATTTAAATTTTTTGAATAAGACGAGCGGTCAAAC
ATGTGCTAAAAAGTCAATGGTG
dot-bracket secondary structure
((
(((((((..(((((.(((((((
((((((((((.((((((((((((((((((((...(((((((......)))))))..))))))))...........(
((((..((((((.............)))))))))))....)))))))))))).))))))))))))
))))).)))))..)))))))))
SIMILARITIES
miRBase
osa-MIR806h
:
1e-41
PMRD
osa-miR806h
:
1e-41
microPC
miR806
:
2e-43
UniProt
no hits
RFAM
MIR812: 5e-57
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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