ABOUT THIS RECORDspecies: Oryza sativa
source: microPC, original name: miR809
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAATGTGAGAAATAATAGAAT miRNA* TCTAACATTTTTTATATTCATA mismatches: 2 bulges: 0 |
pre-miRNA
ATTCTAACATTTTTTATATTCATATTGATATTAATAAATTTAGATATAAATATGAATGTGAGAAATAATAGAAT
dot-bracket secondary structure
((((((..((((((((((((((((((.(((((..........))))).))))))))))))))))))..))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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ATTCTAACATTTTTTATATTCATATTGATATTAATAAATTTAGATATAAATATGAATGTGAGAAATAATAGAAT
dot-bracket secondary structure
((((((..((((((((((((((((((.(((((..........))))).))))))))))))))))))..))))))
SIMILARITIES| miRBase osa-MIR809e: 0.0000008 PMRD osa-miR809e: 0.0000008 microPC miR809: 0.0000000000009 | UniProt no hits RFAM MIR1122: 0.0000002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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