miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST046760
species: Pinus pinaster
miRNA family: MIR1314
source: microPC, original name: miR1314

Taxonomy by NCBI:
Pinus pinaster Pinus Pinus Pinaceae Coniferales Coniferopsida Coniferophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGCCTTGAATGTTAGGAGAA

miRNA*
CTTCAACATTAGAGGCCAATA

mismatches: 4
bulges: 1

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pre-miRNA
TTCTTCAACATTAGAGGCCAATATAGAATCATATTCTTATTCTTAATCGGCCTTGAATGTTAGGAGAA

dot-bracket secondary structure
.(((((((((((.((((((.....(((((.........))))).....)))))).)))))).))))).


SIMILARITIES
miRBase pta-MIR1314: 1e-30

PMRD pta-miR1314: 1e-30

microPC miR1314: 1e-30
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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