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ABOUT THIS RECORD
ID:
MNEST046836
species:
Triticum turgidum subsp. durum
source:
microPC, original name:
miR1439
Taxonomy by NCBI:
Triticum turgidum subsp. durum
Triticum turgidum
Triticum
Triticeae
Pooideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTTGGGACGGAGGGAGTAT
miRNA*
ACTCCCTCCGTCTCAAAATA
mismatches:
1
bulges:
0
View larger
pre-miRNA
T
ACTCCCTCCGTCTCAAAATA
TAAGAGCGTTTTTGGCACTACACTAGTGTAAAAAATGCTCTTATA
TTTTGGGACGGAGGGAGTAT
dot-bracket secondary structure
(
((((((((((((((((((((
(((((((((((((.((((((...)))))).)))))))))))))))
))))))))))))))))))).
SIMILARITIES
miRBase
tae-MIR1120
:
5e-18
PMRD
tae-miR1120
:
5e-18
microPC
miR1436
:
0.000000001
UniProt
no hits
RFAM
MIR1122: 2e-27
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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