miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST046836
species: Triticum turgidum subsp. durum
source: microPC, original name: miR1439

Taxonomy by NCBI:
Triticum turgidum subsp. durum Triticum turgidum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTGGGACGGAGGGAGTAT

miRNA*
ACTCCCTCCGTCTCAAAATA

mismatches: 1
bulges: 0

View larger
pre-miRNA
TACTCCCTCCGTCTCAAAATATAAGAGCGTTTTTGGCACTACACTAGTGTAAAAAATGCTCTTATATTTTGGGACGGAGGGAGTAT

dot-bracket secondary structure
((((((((((((((((((((((((((((((((((.((((((...)))))).)))))))))))))))))))))))))))))))))).


SIMILARITIES
miRBase tae-MIR1120: 5e-18

PMRD tae-miR1120: 5e-18

microPC miR1436: 0.000000001
UniProt no hits

RFAM MIR1122: 2e-27

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record





Liczniki na strone;