ABOUT THIS RECORDspecies: Hordeum vulgare subsp. Vulgare
source: PMRD, original name: hvv-miR156c
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGAGAGCAC miRNA* GCTGAAGCTCATCTGGTCT mismatches: 6 bulges: 1 |
pre-miRNA
TGACAGAAGAGAGAGAGCACAGTCGGAGTCGAGCACGTGCGTCAACTGTCCATCGGAGAACATCTTGTTGCTGCTGCTGCTCTCGGGCGGCGGCGGCAGC
GGGGCGACGGCCTTGAGGAGAGGCTGGCACACGGGGATCTCGAGTGCTGGCGCGCCGGTGCTGAAGCTCATCTGGTCT
dot-bracket secondary structure
.((((((.(((....(((((.((((((.(((((..((((.((((.((.(((.((((....(..((((((((((((((((((....)))))))))))))))
)))..)....))..))))).))..)))).)))).....))))).).)))))......)))))....))).))).))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGACAGAAGAGAGAGAGCACAGTCGGAGTCGAGCACGTGCGTCAACTGTCCATCGGAGAACATCTTGTTGCTGCTGCTGCTCTCGGGCGGCGGCGGCAGC
GGGGCGACGGCCTTGAGGAGAGGCTGGCACACGGGGATCTCGAGTGCTGGCGCGCCGGTGCTGAAGCTCATCTGGTCT
dot-bracket secondary structure
.((((((.(((....(((((.((((((.(((((..((((.((((.((.(((.((((....(..((((((((((((((((((....)))))))))))))))
)))..)....))..))))).))..)))).)))).....))))).).)))))......)))))....))).))).))).
SIMILARITIES| miRBase far-MIR156b: 0.000009 PMRD hvs-miR156: 7e-96 microPC miR157: 0.0001 | UniProt sp|Q6YZE8|SPL16_ORYSJ: 0.0000002 RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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