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ABOUT THIS RECORD

ID: MNEST048656
species: Hordeum vulgare subsp. Vulgare
miRNA family: MIR159
source: PMRD, original name: hvv-miR159a







SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCTG

miRNA*
GATTTTTCTCCTCCACGGTCCAGATCTGGGTGCAAGCTCTTTCTTGCGTTTAGATCTCTCCTTG

mismatches: 5
bulges: 198

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pre-miRNA
TTTGGATTGAAGGGAGCTCTGCATCTTGATCTATTACTAATTAGTTTCCTCTTCCTTCTGCTGCATGCAAGCCTGGAAATGTTTTGCAGATTTTTCTCCT
CCACGGTCCAGATCTGGGTGCAAGCTCTTTCTTGCGTTTAGATCTCTCCTTG
AGCTTGAACTTTTCAAGCTGTGATTTTATGACCACGGTGTTTTGTTTT
CCCCTCAAGGTAATGAATGAAAGATTCAGGTTATGCTTTGTACTTTGCATGGACCTTTATTCCCTTGCCTTTGAGCTGTGGTGTCATTGTTCCTTCGTCT
TTA


dot-bracket secondary structure
...((((.(((((((..((((((....((.(((........)))..))...((((....(((.......)))..))))......))))))..........
.(((((...(((((((..((((((......))))))..)))))))..))...
(((((((.....))))))))))........(((((((...........
...((((((((((.((((((.......(((((((((..........)))).)))))))))))..))))).)))))))))))).......)))))))))))
...



SIMILARITIES
miRBase hvu-MIR159b: 2e-39

PMRD osa-miR159b: 0.0000000003

microPC miR159: 0.001
UniProt no hits

RFAM MIR159: 0.000000005

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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