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ABOUT THIS RECORD
ID:
MNEST048657
species:
Hordeum vulgare subsp. Vulgare
miRNA family:
MIR159
source:
PMRD, original name:
hvv-miR159b
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCTG
miRNA*
GAGCTCCTATCATTCCAATGA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TG
GAGCTCCTATCATTCCAATGA
AGGGTCTACCGGAAGGGTTTGTGCAGCTGCTTGTTCATGGTTCCCACTATCCTATCTCCATTAGAACACGAGGAGAT
AGGCTTGTGGTTTGCATGATCGAGGAGCCGCTTCGATCCCTCGCTGACCGCTG
TTTGGATTGAAGGGAGCTCTG
dot-bracket secondary structure
.(
((((((((.(((.(((((...
((((((...((..((((.(((.((.(((.((((.(((((....((((...(((((((((............))))))
)))...))))....))))).)))).))).))..))).))))))..)))).)).
.))))).))).))))))))).
SIMILARITIES
miRBase
hvu-MIR159a
:
7e-96
PMRD
tae-miR159a
:
3e-79
microPC
miR319
:
5e-32
UniProt
no hits
RFAM
MIR159: 8e-19
Identical with:
hvu-MIR159a
from miRBase (
MNEST041882
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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