ABOUT THIS RECORDspecies: Hordeum vulgare subsp. Vulgare
miRNA family: MIR168
source: PMRD, original name: hvv-miR168
SEQUENCE & STRUCTURE| miRNA TCGCTTGGTGCAGATCGGGAC miRNA* CCCGCCTTGCACCAAGTGA mismatches: 3 bulges: 0 |
pre-miRNA
TCGCTTGGTGCAGATCGGGACCCTCCGCCCGCCCCGACGGGCCGGATCCCGCCTTGCACCAAGTGA
dot-bracket secondary structure
(((((((((((((..(((((...((((((((......)))).)))))))))..)))))))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TCGCTTGGTGCAGATCGGGACCCTCCGCCCGCCCCGACGGGCCGGATCCCGCCTTGCACCAAGTGA
dot-bracket secondary structure
(((((((((((((..(((((...((((((((......)))).)))))))))..)))))))))))))
SIMILARITIES| miRBase hvu-MIR168: 6e-32 PMRD zma-miR168m: 5e-20 microPC miR168: 5e-20 | UniProt no hits RFAM MIR168: 1e-18 |
Identical with: hvu-MIR168 from miRBase (MNEST041888) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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