ABOUT THIS RECORDspecies: Hordeum vulgare subsp. Vulgare
miRNA family: MIR171
source: PMRD, original name: hvv-miR171
SEQUENCE & STRUCTURE| miRNA TGATTGAGCCGTGCCAATATC miRNA* TGTTGGCTCGACTCACTCAGA mismatches: 3 bulges: 0 |
pre-miRNA
GATGTTGGCTCGACTCACTCAGACCACGCCGGAGGGAGCCATCTGCGGCGGCGGTTCTGATTGAGCCGTGCCAATATC
dot-bracket secondary structure
(((((((((.((.((((.(((((((.(((((.(((......))).)))))..)).))))).)))).)).)))))))))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GATGTTGGCTCGACTCACTCAGACCACGCCGGAGGGAGCCATCTGCGGCGGCGGTTCTGATTGAGCCGTGCCAATATC
dot-bracket secondary structure
(((((((((.((.((((.(((((((.(((((.(((......))).)))))..)).))))).)))).)).)))))))))
SIMILARITIES| miRBase hvu-MIR171: 5e-39 PMRD hvv-miR170: 5e-39 microPC miR171: 5e-39 | UniProt no hits RFAM MIR171_1: 0.000001 |
Identical with: miR171 from microPC (MNEST046135) |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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