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ABOUT THIS RECORD
ID:
MNEST048665
species:
Hordeum vulgare subsp. Vulgare
miRNA family:
MIR172
source:
PMRD, original name:
hvv-miR172b
SEQUENCE & STRUCTURE
miRNA
AGAATCCTGATGATGCTGCAG
miRNA*
GGAGCCATCGGGTCGAACC
mismatches:
7
bulges:
2
View larger
pre-miRNA
AT
GGAGCCATCGGGTCGAACC
GGAATGAGGCCGATGGGGCGGCGGGGGCAGCTGCCGCGGCTGTTTTGG
AGAATCCTGATGATGCTGCAG
dot-bracket secondary structure
.(
(.((((((((((.....((
(((((..(((((....((((((.......)))))).))))))))))))
.....)))))))..))).)).
SIMILARITIES
miRBase
bdi-MIR172d
:
1e-24
PMRD
hvv-miR172d
:
4e-46
microPC
miR172
:
0.00007
UniProt
no hits
RFAM
mir-172: 0.0003
Identical with:
hvv-miR172a
from PMRD (
MNEST048664
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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