miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST048781
species:
Nuphar advena
source:
PMRD, original name:
nad-miR157a
Taxonomy by NCBI:
Nuphar advena
Nuphar
Nymphaeaceae
Nymphaeales
basal Magnoliophyta
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGACAGAAGACAGAGAGCAC
miRNA*
GCTCATCATCCAAA
mismatches:
15
bulges:
1
View larger
pre-miRNA
ATGCACTTGCA
GCTCATCATCCAAA
ACAGAACCGAATTGCAAATCCTGTGGCACCATTTTCGCCAATGGCTTTTGGTTCATGGATGGAGCAGTGTTGATC
CCAACATTGTTCCATCCCT
TTGACAGAAGACAGAGAGCAC
dot-bracket secondary structure
.(((....)))
((((.((.......
...((((((((..((........((((.........))))...)).))))))))..((((((((((((((((...
.))))))))))))))))..
.............))))))..
SIMILARITIES
miRBase
no hits
PMRD
nad-miR157c
:
0.0001
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record