miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST050789
species: Oryza sativa
source: PMRD, original name: osa-miRf11574-akr

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GGCTCACCATTGCAGGAGGAA

miRNA*
CCTCTTGCATGCTGAGCTCG

mismatches: 2
bulges: 1

View larger
pre-miRNA
ACGGGCTCACCATTGCAGGAGGAATGGTCGGCTGGGGATCATTGGACCAATGTGCGGCCATGCGTTCATCAACCTTCCTTGCCACCTCCTCTTGCATGCT
GAGCTCG
T


dot-bracket secondary structure
(((((((((.(((.(((((((((..(((.(((.(((((....(((((((.((......)))).)))))......))))).)))))))))))))))))).)
)))))))
)



SIMILARITIES
miRBase no hits

PMRD osa-miRf11707-akr: 2e-54

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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