ABOUT THIS RECORDspecies: Oryza sativa
source: PMRD, original name: osa-miRf11577-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCCGGTTGTTAATACCAACCGG miRNA* GGTTGGTAACACCAACCGGGAC mismatches: 4 bulges: 0 |
pre-miRNA
CTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATCGTAATTTTAGTCCCGGTTGTTAATACCAACCGGAACTAAAG
dot-bracket secondary structure
(((((((.((((((((((....(((((((((((((((.......)))))))))))))))....)))))))))).)))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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CTTTAGTCCCGGTTGGTAACACCAACCGGGACTAAAGATCGTAATTTTAGTCCCGGTTGTTAATACCAACCGGAACTAAAG
dot-bracket secondary structure
(((((((.((((((((((....(((((((((((((((.......)))))))))))))))....)))))))))).)))))))
SIMILARITIES| miRBase no hits PMRD osa-miRf11576-akr: 9e-41 microPC no hits | UniProt no hits RFAM no hits |
Identical with: osa-miRf11576-akr from PMRD (MNEST050791) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
