miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST050798
species: Oryza sativa
source: PMRD, original name: osa-miRf11583-akr

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TACCTCATGGCACCTCCTCAAGAACCGT

miRNA*
GGTCCTTGAGGAGGTACCATGAGGTACC

mismatches: 2
bulges: 0

View larger
pre-miRNA
GAGCAATTTTACGGTCCTTGAGGAGGTACCATGAGGTACCATTTTTTCTATTATAAATTTGGTACCTCTTAAAAAAAAAGTACCTAGTACTACGAGATAC
CAGATTTTACACTAAATTTTTGGTACCTCATGGCACCTCCTCAAGAACCGTAGAATTGCTT


dot-bracket secondary structure
(((((((((((((((.(((((((((((.(((((((((((((.............((((((((((.(((..........(((((...)))))..))).)))
))))))).............))))))))))))).))))))))))).)))))))))))))))



SIMILARITIES
miRBase no hits

PMRD osa-miRf11584-akr: 7e-71

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record





Liczniki na strone;