miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST051305
species: Oryza sativa
source: PMRD, original name: osa-miRf12090-akr

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTAGTCACCTGTGACGGGTCTA

miRNA*
GCCCGTCACAAGTGACTAGATA

mismatches: 1
bulges: 1

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pre-miRNA
CAGGTATCTAGTCACCTGTGACGGGTCTAGAATGGAATCCGTCAGAGAAACACCTTTGTCGGCTTCCACTTCTGGCCCGTCACAAGTGACTAGATACCTG


dot-bracket secondary structure
(((((((((((((((.(((((((((.(((((((((((.(((.(((((......))))).))).))))).))))))))))))))).)))))))))))))))



SIMILARITIES
miRBase osa-MIR1883b: 2e-20

PMRD osa-miR1883b: 2e-20

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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