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ABOUT THIS RECORD
ID:
MNEST051305
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf12090-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCTAGTCACCTGTGACGGGTCTA
miRNA*
GCCCGTCACAAGTGACTAGATA
mismatches:
1
bulges:
1
View larger
pre-miRNA
CAGGTA
TCTAGTCACCTGTGACGGGTCTA
GAATGGAATCCGTCAGAGAAACACCTTTGTCGGCTTCCACTTCTG
GCCCGTCACAAGTGACTAGATA
CCTG
dot-bracket secondary structure
((((((
(((((((((.(((((((((.(((
((((((((.(((.(((((......))))).))).))))).)))))
)))))))))).)))))))))))
))))
SIMILARITIES
miRBase
osa-MIR1883b
:
2e-20
PMRD
osa-miR1883b
:
2e-20
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record