ABOUT THIS RECORDspecies: Oryza sativa
source: PMRD, original name: osa-miRf12095-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GGTTGGTAACACCAATCGGG miRNA* CGGTTGGTGTTACCAACCGG mismatches: 0 bulges: 0 |
pre-miRNA
CTTTAGTCTTGGTTGGTAACACCAATCGGGGCTAAAGATCATTTTTAGTTCCGGTTCGATTGTTGTCAGGTATGTGTCAAGCCACCAACCATCTTTAGTC
CCGGTTGGTGTTACCAACCGGGATTAAAG
dot-bracket secondary structure
((((((((((((((((((((((((((((((((((((((...................(((....))).(((..(((......)))..))).)))))))))
)))))))))))))))))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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CTTTAGTCTTGGTTGGTAACACCAATCGGGGCTAAAGATCATTTTTAGTTCCGGTTCGATTGTTGTCAGGTATGTGTCAAGCCACCAACCATCTTTAGTC
CCGGTTGGTGTTACCAACCGGGATTAAAG
dot-bracket secondary structure
((((((((((((((((((((((((((((((((((((((...................(((....))).(((..(((......)))..))).)))))))))
)))))))))))))))))))))))))))))
SIMILARITIES| miRBase no hits PMRD osa-miRf12094-akr: 3e-69 microPC no hits | UniProt no hits RFAM no hits |
Identical with: osa-miRf12096-akr from PMRD (MNEST051311) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
