ABOUT THIS RECORDspecies: Oryza sativa
miRNA family: MIRf89
source: PMRD, original name: osa-miRf12096-akr
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTAGTCCCGGTTGGTGTTACC miRNA* TAACACCAATCGGGGCTAAAG mismatches: 0 bulges: 0 |
pre-miRNA
AGTCTTGGTTGGTAACACCAATCGGGGCTAAAGATCATTTTTAGTTCCGGTTCGATTGTTGTCAGGTATGTGTCAAGCCACCAACCATCTTTAGTCCCGG
TTGGTGTTACCAACCGGGATT
dot-bracket secondary structure
((((((((((((((((((((((((((((((((((...................(((....))).(((..(((......)))..))).)))))))))))))
)))))))))))))))))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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AGTCTTGGTTGGTAACACCAATCGGGGCTAAAGATCATTTTTAGTTCCGGTTCGATTGTTGTCAGGTATGTGTCAAGCCACCAACCATCTTTAGTCCCGG
TTGGTGTTACCAACCGGGATT
dot-bracket secondary structure
((((((((((((((((((((((((((((((((((...................(((....))).(((..(((......)))..))).)))))))))))))
)))))))))))))))))))))
SIMILARITIES| miRBase no hits PMRD osa-miRf12095-akr: 2e-64 microPC no hits | UniProt no hits RFAM no hits |
Identical with: osa-miRf12095-akr from PMRD (MNEST051310) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
download this record
