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ABOUT THIS RECORD
ID:
MNEST051314
species:
Oryza sativa
source:
PMRD, original name:
osa-miRf12099-akr
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTCTCTCGTTTTCCACGCGCACG
miRNA*
TGCGCGCGGAAAATGAGAGAGGT
mismatches:
1
bulges:
0
View larger
pre-miRNA
GTTTGAAAAGTG
TGCGCGCGGAAAATGAGAGAGGT
GGATTGCAGTGCCGAACTGCCCCTTTTCCCAACCCTTCTCCAC
CTCTCTCGTTTTCCACGCGCAC
G
CTTTTTATAC
dot-bracket secondary structure
((.(((((((((
((((((.((((((((((((((((
(((..(((((.....)))))..................)))))
)))))))))))))).)))))))
)
))))))).))
SIMILARITIES
miRBase
no hits
PMRD
osa-miRf12100-akr
:
6e-55
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
osa-miRf12100-akr
from PMRD (
MNEST051315
)
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
additional data
download this record