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ABOUT THIS RECORD

ID: MNEST051314
species: Oryza sativa
source: PMRD, original name: osa-miRf12099-akr

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCTCTCGTTTTCCACGCGCACG

miRNA*
TGCGCGCGGAAAATGAGAGAGGT

mismatches: 1
bulges: 0

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pre-miRNA
GTTTGAAAAGTGTGCGCGCGGAAAATGAGAGAGGTGGATTGCAGTGCCGAACTGCCCCTTTTCCCAACCCTTCTCCACCTCTCTCGTTTTCCACGCGCAC
G
CTTTTTATAC


dot-bracket secondary structure
((.(((((((((((((((.(((((((((((((((((((..(((((.....)))))..................))))))))))))))))))).)))))))
)
))))))).))



SIMILARITIES
miRBase no hits

PMRD osa-miRf12100-akr: 6e-55

microPC no hits
UniProt no hits

RFAM no hits

Identical with: osa-miRf12100-akr from PMRD (MNEST051315)

MORE

miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
additional data
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