miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

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ABOUT THIS RECORD

ID: MNEST051325
species: Populus euphratica
miRNA family: MIR2910
source: PMRD, original name: peu-miR2910

Taxonomy by NCBI:
Populus euphratica Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAGTTGGTGGAGCGATTTGTC

miRNA*
CGAGACCTCAGCCTGCTA

mismatches: 4
bulges: 1

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pre-miRNA
TAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTA

dot-bracket secondary structure
((((.(((.(((.(.(((((.(.((((((...)))))).)))))).)))).))).))))


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM SSU_rRNA_eukarya: 1e-26

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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