miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST051330
species: Populus euphratica
source: PMRD, original name: peu-miR2914

Taxonomy by NCBI:
Populus euphratica Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CATGGTGGTGACGGGTGACGGAG

miRNA*
CTGCCCTATCAACTTTCGATGGT

mismatches: 5
bulges: 4

View larger
pre-miRNA
TTCTGCCCTATCAACTTTCGATGGTAGGATAGAGGCCTACCATGGTGGTGACGGGTGACGGAG

dot-bracket secondary structure
.(((((((..(((.((..(.((((((((.......)))))))).).)))))..)).).)))).


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM SSU_rRNA_eukarya: 6e-29

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record





Liczniki na strone;