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ABOUT THIS RECORD

ID: MNEST052411
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10589-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCCGTCGGTAATACCGTCGG

miRNA*
GACGGAATTACCGACGGACA

mismatches: 1
bulges: 0

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pre-miRNA
TTTCCGACGGAATTACCGACGGACATTAATTGTTGTCGGTGGCATTAAATTCCGTCGGTAATACCGTCGGAAA

dot-bracket secondary structure
.(((((((((.((((((((((((..(((((.(((......))))))))..)))))))))))).))))))))).


SIMILARITIES
miRBase no hits

PMRD ptc-miRf11212-akr: 5e-36

microPC no hits
UniProt no hits

RFAM no hits

Identical with: ptc-miRf11212-akr from PMRD (MNEST053034)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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