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ABOUT THIS RECORD
ID:
MNEST052411
species:
Populus trichocarpa
source:
PMRD, original name:
ptc-miRf10589-akr
Taxonomy by NCBI:
Populus trichocarpa
Populus
Saliceae
Salicaceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCCGTCGGTAATACCGTCGG
miRNA*
GACGGAATTACCGACGGACA
mismatches:
1
bulges:
0
View larger
pre-miRNA
TTTCC
GACGGAATTACCGACGGACA
TTAATTGTTGTCGGTGGCATTAAAT
TCCGTCGGTAATACCGTCGG
AAA
dot-bracket secondary structure
.((((
(((((.((((((((((((..
(((((.(((......))))))))..
)))))))))))).)))))))
)).
SIMILARITIES
miRBase
no hits
PMRD
ptc-miRf11212-akr
:
5e-36
microPC
no hits
UniProt
no hits
RFAM
no hits
Identical with:
ptc-miRf11212-akr
from PMRD (
MNEST053034
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
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