miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST052656
species: Populus trichocarpa
source: PMRD, original name: ptc-miRf10834-akr

Taxonomy by NCBI:
Populus trichocarpa Populus Saliceae Salicaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTACCGACGGAATTGCGGACG

miRNA*
TCGGTAAGGCCGTCGGTAGAC

mismatches: 3
bulges: 0

View larger
pre-miRNA
TCCGTCGGTAAGGCCGTCGGTAGACACTGACGGCCAAATTCAGTCAGTAGTTACCGACGGAATTGCGGACGGA

dot-bracket secondary structure
((((((.((((..((((((((((..((((((...........))))))..))))))))))..)))).))))))


SIMILARITIES
miRBase no hits

PMRD ptc-miRf11736-akr: 0.00000001

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record





Liczniki na strone;