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ABOUT THIS RECORD

ID: MNEST054657
species: Solanum tuberosum
source: PMRD, original name: stu-miR156b

Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGAGAGCAC

miRNA*
CAACTGAAGCAAA

mismatches: 15
bulges: 2

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pre-miRNA
ATGCTGCTTCATTTCATGGAATGTCTTTGATGCTCCACTTGATGAAGCTGCGACGACAACTGAAGCAAATCAATAGTGGTACCATCTTCACAAGAAAGTA
GATTCCTGGTGTTTACGTAATCTGATCCTTGAAGACTTCCACAATTGTTTCTTAGCATCTGTTCCAAGTGACCCTCTGCAGAAATTACTTCAGATAAATT
ATAAATATTGGACACTGTACTTGCTGAACCCTTTGGGCTAGCTCCTGGGAAACATTCAGATGTCTGTGTCATGTTGTAATGGGTGTTACTGCGAGGTGTA
ATAAGGTGGTGAGCACTAGGAGGAACTACAGATGAATAATTTGATGTGTCCTGTGATTGAGATGACAGAAGAGAGAGAGCAC


dot-bracket secondary structure
.(((.((((((((...((((..(((...)))..))))...)))))))).))).......(((...((..(((((.(..(.((((((.((....))..(((
(.((((((((((((((...((((.(((((((.........(((..((((....))))..)))....((((((((((((.((......)).))))...(((
((((......(((((.(.((...((((((((...(((....)))..))).....)))))..))).)))))...))))))).)).)))))).))))).)).
...)))).))))))))))))))...)))).............)))).)).)..).)))))..)).)))..............



SIMILARITIES
miRBase mtr-MIR156: 0.000005

PMRD gma-miR156h: 0.00000002

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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