ABOUT THIS RECORDspecies: Solanum tuberosum
source: PMRD, original name: stu-miR156e
Taxonomy by NCBI:
Solanum tuberosum Solanum Solaneae Solanoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGAGAGCAC miRNA* CACCTCG mismatches: 12 bulges: 1 |
pre-miRNA
TGACAGAAGAGAGAGAGCACGAGGAAATTCCGGTCCTGTAACCATATTGAACATGGATTCCTTGGCACCTCG
dot-bracket secondary structure
..........(((.(.((.(((((((..((((.((..(((....))).))...))))))))))))).)))).
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
TGACAGAAGAGAGAGAGCACGAGGAAATTCCGGTCCTGTAACCATATTGAACATGGATTCCTTGGCACCTCG
dot-bracket secondary structure
..........(((.(.((.(((((((..((((.((..(((....))).))...))))))))))))).)))).
SIMILARITIES| miRBase zma-MIR156j: 0.0002 PMRD stu-miR157b: 5e-33 microPC miR157: 0.0002 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
download this record
