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ABOUT THIS RECORD
ID:
MNEST054669
species:
Solanum tuberosum
miRNA family:
MIR403
source:
PMRD, original name:
stu-miR403
Taxonomy by NCBI:
Solanum tuberosum
Solanum
Solaneae
Solanoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CTAGATTCACGCACAAACTCG
miRNA*
CGTTTGTGCGTGAATCTAACA
mismatches:
4
bulges:
0
View larger
pre-miRNA
GGAAGAGGCATATTTCA
CGTTTGTGCGTGAATCTAACA
ACCCTTTTCATCAGAAAAACTGTTGTTGTTTG
CTAGATTCACGCACAAACTCG
TAATATGTA
TTTTTC
dot-bracket secondary structure
((((((.(((((((...
.((((((((((((((((((((
((..(((((....)))))...)))))......
.)))))))))))))))))...
.))))))).
))))))
SIMILARITIES
miRBase
tcc-MIR403a
:
0.0000003
PMRD
sly-miR403
:
3e-41
microPC
miR403
:
7e-36
UniProt
no hits
RFAM
MIR403: 0.0000004
Identical with:
miR403
from microPC (
MNEST045272
)
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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