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ABOUT THIS RECORD

ID: MNEST054757
species: Triticum monococcum
source: PMRD, original name: tmo-miR1122

Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TACTCCCTCCGTCCCAAAATTGTT

miRNA*
 GAATTTTGGGATGGAGGGAATACT

mismatches: 2
bulges: 0
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pre-miRNA
 TTTTGGCCTACATAGCCCACTTTTGTACTCCCTCCGTCCCAAAATTGTTGTCTTAAATTTGTCTAAATATGGATGTATGTAGTTACATTTTAGTGTTAGA
TACATCCGTATCTAAACAAATGTAAGACAAGAATTTTGGGATGGAGGGAATACTACCTCATATTTAGTATAAAATTTTGA

dot-bracket secondary structure
....(((.......))).......(((.((((((((((((((((((.((((((((.((((((.((.((((((((((((.((...((((....)))))).)
))))))))))).)).)))))).)))))))).)))))))))))))))))).)))...........................


SIMILARITIES
miRBase tae-MIR1122: 8e-28

PMRD hpi-miR1122: 3e-33

microPC miR1122: 0.0000006		UniProt no hits

RFAM MIR1122: 2e-71

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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