miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Mesembryanthemum crystallinum



ABOUT THIS RECORD

ID: MNEST001550
species: Mesembryanthemum crystallinum
miRNA family: MIR396
source: miRNEST

Taxonomy by NCBI:
Mesembryanthemum crystallinum Mesembryanthemum Aizoaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAACTT

miRNA*
GTTCAAGAAAGCTGTGGGAAA

mismatches: 0
bulges: 0

View larger
pre-miRNA
CTGCCATGCTTTTCCACAGCTTTCTTGAACTTTCCGGTTCTTTTCTTCTTTTTTTTTCTTTCTAGTGAGAAACAAACCATCATTGGGAAAGTTCAAGAAA
GCTGTGGGAAA
ATATGGCG


dot-bracket secondary structure
..((((((.((((((((((((((((((((((((((((((..((((((...................))))))..)))).......)))))))))))))))
)))))))))))
.)))))).



SIMILARITIES
miRBase vvi-MIR396b: 0.00000000002

PMRD vvi-miR396b: 0.00000000002

microPC miR396: 1e-34
UniProt no hits

RFAM MIR396: 0.000000002
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
download this record





Liczniki na strone;