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Species belonging to selected taxon:

Mesembryanthemum crystallinum



ABOUT THIS RECORD

ID: MNEST001552
species: Mesembryanthemum crystallinum
miRNA family: MIR1023
source: miRNEST

Taxonomy by NCBI:
Mesembryanthemum crystallinum Mesembryanthemum Aizoaceae Caryophyllales core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCTCTCTCTCCATTTCTCTCT

miRNA*
AGAAAAATGGCGGAACAAGG

mismatches: 5
bulges: 1

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pre-miRNA
ACCCACACCCCTCTCTCTCTCCATTTCTCTCTCTCTCTCTCCTCTCTATCCCTCTCTCATATAAGACCTTCGATCCTTCAAATTCTTCACCTCATTTCGT
ATAAAAACACTATCATTTTCAAATTCTTGGCGCTTTGATCTCTCATTTGAACACTATAAAGCTCTGAAAACCCCCTATTTTCCCCCAAATCAGCTGACCC
AGAAAAGAGAAAACCCTAGATTTGGGTTTGGTAGGATTAGGGTGATTTCAAGAAGAGGGGGAGGGAGGTGATCCCAGATATATAGATAGAGAAAAATGGC
GGAACAAGG
CTTGGAAG


dot-bracket secondary structure
..(((....(((...(((..((((((.(((((.((((...(((((((.(((((((.((...(((((..................................
........................)))))..((((((.....((....))......))))))..(((((...(((((...(((.(((........(((((
(((....((......))...)))))))))))..))).)))))...))))).))))))))).))))))).)).............)).))))).)))))).
)))...)))
..)))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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