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Species belonging to selected taxon:
Mesembryanthemum crystallinum
ABOUT THIS RECORD
ID:
MNEST044921
species:
Mesembryanthemum crystallinum
source:
microPC, original name:
miR396
Taxonomy by NCBI:
Mesembryanthemum crystallinum
Mesembryanthemum
Aizoaceae
Caryophyllales
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAAC
miRNA*
TCAATAAAGCTGTGGGA
mismatches:
1
bulges:
0
View larger
pre-miRNA
TTCCACAGCTTTCTTGAAC
TGCATCTTCCCTAATTTTTTTATCTTTTGTTTTTCCTCTCTCAGATCCAATTTTTTCTTTGGTAAATACTTATAATTTATC
AAAAAAAAAAAAAGATGGATTTTTGGGAATTGAAAGATGGAAAATTTTAATTTGTGGGTTGCGGT
TCAATAAAGCTGTGGGA
dot-bracket secondary structure
((((((((((((.((((((
((((....(((.(((((((((((((((((...(((((.....(((((((.((((((.((((((((((.......)))))))
))).)))))).....)))))))..))))).))))))))))))).....))))...))).))))))
)))).))))))))))))
SIMILARITIES
miRBase
osa-MIR396b
:
0.00000004
PMRD
osa-miR396b
:
0.00000004
microPC
miR396
:
3e-33
UniProt
no hits
RFAM
MIR396: 0.0000007
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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