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Species belonging to selected taxon:
Anopheles gambiae
,
Anopheles stephensi
ABOUT THIS RECORD
ID:
MNEST035280
species:
Anopheles gambiae
miRNA family:
mir-12
source:
miRBase, original name:
aga-mir-12
(
MI0006240
)
Taxonomy by NCBI:
Anopheles gambiae
gambiae species complex
Pyretophorus
Cellia
Anopheles
Anophelinae
Culicidae
Culicoidea
Culicimorpha
Nematocera
Diptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGAGTATTACATCAGGTACTGGT
miRNA*
CAGTACTTGTGTTATACTCTCC
mismatches:
2
bulges:
1
View larger
pre-miRNA
CCGGGG
TGAGTATTACATCAGGTACTGGT
GTGTAATTTAAACGACCATCGGACATGGGGGCTGCCCAACTCCTCTTCTGTCCCCGGTCAAGCTAT
CAGTA
CTTGTGTTATACTCTCC
dot-bracket secondary structure
....((
.((((((.(((.(((((((((((
(.((........((.....))(((.(((((((.................))))))))))..)))))
)))))
))))))).)))))).))
SIMILARITIES
miRBase
ame-mir-12
:
0.00000002
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
mir-12: 0.0000004
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
evidence:
cloned
references
[
1
] Winter F, Edaye S, Huttenhofer A, Brunel C,
Nucleic Acids Res. 35:6953-6962(2007).
,
"Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"