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Species belonging to selected taxon:

Anopheles gambiae, Anopheles stephensi



ABOUT THIS RECORD

ID: MNEST035300
species: Anopheles gambiae
miRNA family: mir-276
source: miRBase, original name: aga-mir-276 (MI0001614)

Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGCGAGGTATAGAGTTCCTA

miRNA*
GGAACTTCATACCGTGCTCT

mismatches: 3
bulges: 0

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pre-miRNA
GGTGACTGCCATCAGCGAGGTATAGAGTTCCTACGGTAATCGATTGAAACTTTGTAGGAACTTCATACCGTGCTCTTGGATAGCCGTTTACC

dot-bracket secondary structure
(((.....(((..((((.(((((..(((((((((((...((....))....)))))))))))..))))).))))..)))...))).......


SIMILARITIES
miRBase aga-mir-276: 3e-47

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-276: 5e-46

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Mead EA, Tu Z, BMC Genomics. 9:244(2008)., "Cloning, characterization, and expression of microRNAs from the Asian malaria mosquito, Anopheles stephensi"




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