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Species belonging to selected taxon:

Anopheles gambiae, Anopheles stephensi



ABOUT THIS RECORD

ID: MNEST035271
species: Anopheles gambiae
miRNA family: mir-2
source: miRBase, original name: aga-mir-2-1 (MI0001621)

Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATCACAGCCAGCTTTGATGAGC

miRNA*
TCTCAAAGTGGCTGTGAAATG

mismatches: 2
bulges: 2

View larger
pre-miRNA
GCATGTCCTGTCTCTCAAAGTGGCTGTGAAATGGTGCACTTTCGATCCGATATCTCATATCACAGCCAGCTTTGATGAGCTAGGCCG

dot-bracket secondary structure
....(.((((.((((((((((((((((((.((((.......(((...)))....)))).))))))))).)))))).))).)))).).


SIMILARITIES
miRBase dan-mir-2a-2: 0.000000001

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-2: 2e-36

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Griffiths-Jones S, Unpublished (2009).,




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