ABOUT THIS RECORDspecies: Anopheles gambiae
miRNA family: mir-275
source: miRBase, original name: aga-mir-275 (MI0001613)
Taxonomy by NCBI:
Anopheles gambiae gambiae species complex Pyretophorus Cellia Anopheles Anophelinae Culicidae Culicoidea Culicimorpha Nematocera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAGGTACCTGAAGTAGCGCGCG miRNA* CGCGCTAAGCAGGAACCGGGACT mismatches: 5 bulges: 2 |
pre-miRNA
TGAGCCGTCTAATGACACGCGCTAAGCAGGAACCGGGACTTGGTACACATTCGCTAGCAGTCAGGTACCTGAAGTAGCGCGCGTTATTCGGCTCA
dot-bracket secondary structure
.((((((...((((((.(((((((..((((.(((..((((((((........))))..)))).))).))))...))))))).)))))))))))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"
TGAGCCGTCTAATGACACGCGCTAAGCAGGAACCGGGACTTGGTACACATTCGCTAGCAGTCAGGTACCTGAAGTAGCGCGCGTTATTCGGCTCA
dot-bracket secondary structure
.((((((...((((((.(((((((..((((.(((..((((((((........))))..)))).))).))))...))))))).)))))))))))).
SIMILARITIES| miRBase cqu-mir-275: 6e-24 PMRD no hits microPC no hits | UniProt no hits RFAM mir-275: 2e-45 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
evidence: cloned
references
[1] Winter F, Edaye S, Huttenhofer A, Brunel C, Nucleic Acids Res. 35:6953-6962(2007)., "Anopheles gambiae miRNAs as actors of defence reaction against Plasmodium invasion"
