miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Anoplopoma fimbria



ABOUT THIS RECORD

ID: MNEST009363
species: Anoplopoma fimbria
miRNA family: miR-2127
source: miRNEST

Taxonomy by NCBI:
Anoplopoma fimbria Anoplopoma Anoplopomatidae Anoplopomatoidei Scorpaeniformes Percomorpha Euacanthopterygii Acanthopterygii Holacanthopterygii Euacanthomorpha Acanthomorpha Ctenosquamata Eurypterygii Neoteleostei Neognathi Euteleostei Clupeocephala Elopocephala Teleostei Neopterygii Actinopteri Actinopterygii Euteleostomi Teleostomi Gnathostomata Vertebrata Craniata Chordata Deuterostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
AGGGAGGGGAGGGAGGGCTGG

miRNA*
TTGCCCTCTTTCCTCCTCCTCC

mismatches: 2
bulges: 1

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pre-miRNA
GCAGCATGCCTGGAGGGAAAGCAGGCAAGGGAGGGAGGGGAGGGAGGGCTGGGGGAGTGGAAATCCATTATATACACAGGCTGGCGGGCTATCCATCCGG
AACTGCAAGTCATTTCCTCTCTACCTTGCCCTCTTTCCTCCTCCTCCTCCTCCTCTCAGCACTCCACTTGCTCTA


dot-bracket secondary structure
..((((....(((((.((.((.(((...(((((((.(((((((((((((.((.((((.((((((..............((((.((((....(((....))
).)))).)))))))))).)))).))..))))))))))))).)))))))))).)).))....)))))..))))...



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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