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Species belonging to selected taxon:

Acyrthosiphon pisum, Aphis gossypii, Myzus persicae



ABOUT THIS RECORD

ID: MNEST008441
species: Acyrthosiphon pisum
miRNA family: mir-3015
source: miRNEST

Taxonomy by NCBI:
Acyrthosiphon pisum Acyrthosiphon Macrosiphini Aphidinae Aphididae Aphidoidea Aphidomorpha Aphidiformes Sternorrhyncha Hemiptera Paraneoptera Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CCAGACATTGTAAGAACGGCC

miRNA*
CTGGTTCTTACGACCTCCGGTT

mismatches: 3
bulges: 1

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pre-miRNA
AGACTTAGGCTGGTTCTTACGACCTCCGGTTAAAGTTAACCGACACTTAACCGGCGGAATTCTGCCAGTAATAAAATCTGTTATCATCCGGTTAGCGTAA
ACCGACACTTTACCAGACATTGTAAGAACGGCCCTTAAT


dot-bracket secondary structure
.......(((((.(((((((((..((.(((.(((((((((.((...(((((.(((((....))))).))..)))..)).)))).....(((((......)
))))..)))))))).))..))))))))))))))......



SIMILARITIES
miRBase api-mir-3015a-1: 0.00000000000003

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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