miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Species belonging to selected taxon:
Bombus terrestris
,
Apis mellifera
ABOUT THIS RECORD
ID:
MNEST035409
species:
Apis mellifera
miRNA family:
mir-993
source:
miRBase, original name:
ame-mir-993
(
MI0010620
)
Taxonomy by NCBI:
Apis mellifera
Apis
Apini
Apinae
Apidae
Apoidea
Aculeata
Apocrita
Hymenoptera
Endopterygota
Neoptera
Pterygota
Dicondylia
Insecta
Hexapoda
Pancrustacea
Mandibulata
Arthropoda
Panarthropoda
Protostomia
Coelomata
Bilateria
Eumetazoa
Metazoa
Fungi/Metazoa group
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
GAAGCTCGTCTCTACAGGTATCT
miRNA*
CTACCCTGTAGATCCGGGCTTTTG
mismatches:
4
bulges:
1
View larger
pre-miRNA
GGCACATTCGTGAT
CTACCCTGTAGATCCGGGCTTTTG
TAGAATTGTAAATATCA
GAAGCTCGTCTCTACAGGTATCT
TACGGATGACA
dot-bracket secondary structure
....(((((((((.
.((((.((((((..((((((((((
...............))
))))))))..))))))))))..)
))))))))...
SIMILARITIES
miRBase
nvi-mir-993
:
4e-43
PMRD
no hits
microPC
no hits
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
additional data
download this record
references
[
1
] Griffiths-Jones S,
Unpublished (2009).
,