miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Apis mellifera



ABOUT THIS RECORD

ID: MNEST035410
species: Apis mellifera
miRNA family: mir-279
source: miRBase, original name: ame-mir-996 (MI0010610)

Taxonomy by NCBI:
Apis mellifera Apis Apini Apinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGACTAGATACATACTCGTCT

miRNA*
GCGAGTATGAATGTGGTGCACG

mismatches: 2
bulges: 1

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pre-miRNA
AAACAGATAATTCCATAGGCGAGTATGAATGTGGTGCACGTTTTGATTTATTTCGTGACTAGATACATACTCGTCTACGGTAATCTGTTTT

dot-bracket secondary structure
((((((((....((.((((((((((((.((.((((.((((.............)))))))).)).)))))))))))).))..)))))))).


SIMILARITIES
miRBase tca-mir-279d: 0.0003

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-996: 2e-45

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Griffiths-Jones S, Unpublished (2009).,




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