ABOUT THIS RECORDspecies: Nasonia giraulti
miRNA family: mir-375
source: miRBase, original name: ngi-mir-375 (MI0016625)
Taxonomy by NCBI:
Nasonia giraulti Nasonia Pteromalinae Pteromalidae Chalcidoidea Chaldicoidea group Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTTGTTCGTTCGGCTCGAGTTA miRNA* CATCGATCCCAACGATCAATAAACT mismatches: 5 bulges: 3 |
pre-miRNA
TGGTCCATCGATCCCAACGATCAATAAACTGTGTTATTAAACAAGTTTGTTCGTTCGGCTCGAGTTATCA
dot-bracket secondary structure
.(((...((((.((.(((((...(((((((.((((....)))))))))))))))).)).))))...))).
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Sathyamurthy G, Swamy NR, Int J Insect Sci. 2:1-13(2010)., "Computational Identification and Characterization of Putative miRNAs in Nasonia Species"
TGGTCCATCGATCCCAACGATCAATAAACTGTGTTATTAAACAAGTTTGTTCGTTCGGCTCGAGTTATCA
dot-bracket secondary structure
.(((...((((.((.(((((...(((((((.((((....)))))))))))))))).)).))))...))).
SIMILARITIES| miRBase nvi-mir-375: 4e-33 PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Sathyamurthy G, Swamy NR, Int J Insect Sci. 2:1-13(2010)., "Computational Identification and Characterization of Putative miRNAs in Nasonia Species"
