ABOUT THIS RECORDspecies: Apis mellifera
miRNA family: mir-252
source: miRBase, original name: ame-mir-252 (MI0010608)
Taxonomy by NCBI:
Apis mellifera Apis Apini Apinae Apidae Apoidea Aculeata Apocrita Hymenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA ATAAGTACTAGTGCCGCAGGAG miRNA* CCTGCTGCTCAAGTGCTTATCA mismatches: 3 bulges: 0 |
pre-miRNA
AATCCTGTCTTGTTCATAAGTACTAGTGCCGCAGGAGTGACTAGGTTGGGTTAGAAATTACCATATCTCCTGCTGCTCAAGTGCTTATCAATGGGTCCGG
dot-bracket secondary structure
...((.(.((..((.(((((((((.(.((.(((((((...........(((.(....).)))....))))))).)).).))))))))).))..)).).))
SIMILARITIES
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miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
AATCCTGTCTTGTTCATAAGTACTAGTGCCGCAGGAGTGACTAGGTTGGGTTAGAAATTACCATATCTCCTGCTGCTCAAGTGCTTATCAATGGGTCCGG
dot-bracket secondary structure
...((.(.((..((.(((((((((.(.((.(((((((...........(((.(....).)))....))))))).)).).))))))))).))..)).).))
SIMILARITIES| miRBase nvi-mir-252: 3e-29 PMRD no hits microPC no hits | UniProt no hits RFAM mir-252: 5e-43 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record
references
[1] Griffiths-Jones S, Unpublished (2009).,
