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Species belonging to selected taxon:

Arachis duranensis, Arachis hypogaea, Arachis ipaensis



ABOUT THIS RECORD

ID: MNEST000100
species: Arachis duranensis
miRNA family: MIR408
source: miRNEST

Taxonomy by NCBI:
Arachis duranensis Arachis Dalbergieae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTGGGGACAGGCAGAGCATGA

miRNA*
ATGCACTGCCTCTTCCCTGGCT

mismatches: 2
bulges: 1

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pre-miRNA
TAGCCAGAGAGAAAGAGAAGAGATGACAAAGACTGGGGACAGGCAGAGCATGAATGGAACTATCAATAGACACATTTGTTCACTGAGTTACAAAGGGAAA
CACACACATATACATACATAGATAAAGGCATGATACATCCATCATCTCATCTATTGTGGCTACGCTCATGCACTGCCTCTTCCCTGGCTCTCTCGTTCTT
TTTCCTTCTTTATTTATC


dot-bracket secondary structure
.......((((((.((((((.(((((...((((((((((.((((((.((((((.((...(((.(((((((.((....))....((((........(((..
.....................................))).....))))))))))))))...)).)))))).))))))..))))))).))).))))).))
)))).)))))).......



SIMILARITIES
miRBase ahy-MIR408: 2e-22

PMRD gma-miR408a: 0.00000000005

microPC miR408: 0.00000000000005
UniProt no hits

RFAM MIR408: 0.00000000000006
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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