miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST046069
species: Helianthus annuus
source: microPC, original name: miR156

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
GACAGAAGAGAGTGAGCAC

miRNA*
GCTCACTTCTCTTTCTGTC

mismatches: 0
bulges: 2

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pre-miRNA
GACAGAAGAGAGTGAGCACAGGCCGGCAACTGTATACGGAGATTATACTCTTGTTGGAATTATGCGTGTGCTCACTTCTCTTTCTGTC

dot-bracket secondary structure
((((((((((((((((((((.((((((((..(((((.......)))))..)))))).......)).))))))))).)))).)))))))


SIMILARITIES
miRBase tcc-MIR156c: 0.000004

PMRD stu-miR156a: 0.00002

microPC miR156: 7e-45
UniProt no hits

RFAM mir-156: 0.00007

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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