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Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST048643
species: Helianthus annuus
miRNA family: MIR157
source: PMRD, original name: han-miR157b

Taxonomy by NCBI:
Helianthus annuus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TTGACAGAAGAGAGAGAGCAC

miRNA*
 GCTCCGCTTCTTCCCATCAA

mismatches: 6
bulges: 3
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pre-miRNA
 TTGACAGAAGAGAGAGAGCACGGTATGCTTTTGCGTTGGAACATGCATACGAAAGTAACTAATCATACGATAAATTATCAAAACTACTGTCGATAGAGTA
ATTAGGAAAACAAACCTTGATGAAAAACACCGGCTGTGTGCTGGGAATTGCGTGTGGTTTCCCAAATAGAGTTCAAAGCAGGTTCGGGTTGAACCAGTTC
AGGAACATTGTTAGACACAAAACTTATTTGATGTTGCCCATCATAAAATGATGAAGACTGACTTCTTGAGTTAAAGTGGACAGTTTCTTTTTCTTTTTGT
GGCTTTCGGCGACGGGCATTGTGGTCAGAAAGCCTCTGGCGACAGCTCCGCTTCTTCCCATCAA

dot-bracket secondary structure
.(((..((((((.(.((((..((((.(.(((((.(((..((((....(((....)))...(((((((((.....((((((..(((.(((....)))))).
...(((........)))))))))......(((((.....)))))......)))))))))...........((((..(((.(((((.....))))).))).
..))))..)))).))).)))))).))))...(((((((....((((((.((.((((((((.((.(((......))).)).)))..))))).)).))))))
((((((((((.(((.....))).))).)))))))...))))))))))))..))))))...))).


SIMILARITIES
miRBase far-MIR529: 0.0003

PMRD han-miR156: 0

microPC miR157: 0.0003		UniProt sp|Q6H509|SPL4_ORYSJ: 0.000000001

RFAM no hits

Identical with: han-miR156 from PMRD (MNEST048641)

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
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