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Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST000904
species: Helianthus tuberosus
miRNA family: MIR2025
source: miRNEST

Taxonomy by NCBI:
Helianthus tuberosus Helianthus Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 GTGTTCTCAGGTCGCCCCCGC

miRNA*
 AGGTGTGACATGAGAACACAC

mismatches: 5
bulges: 0
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pre-miRNA
 ACCAACAGGTGTGACATGAGAACACACGATATACTTCGATATTTTTCACGTGTTCTCAGGTCGCCCCCGCTGAATTTTCT

dot-bracket secondary structure
.......((.(((((.(((((((((..((.(((......)))...))..))))))))).))))).))....((....)).


SIMILARITIES
miRBase tae-MIR398: 0.000004

PMRD tae-miR2025: 0.000004

microPC miR398: 3e-28		UniProt no hits

RFAM MIR398: 0.000001		most similar mature miRNAs

Identical with: miR398 from microPC (MNEST046312)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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