miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Guizotia abyssinica, Helianthus argophyllus, Helianthus ciliaris, Helianthus exilis, Helianthus paradoxus, Helianthus petiolaris, Helianthus tuberosus, Parthenium argentatum, Zinnia violacea, Artemisia annua, Helianthus annuus



ABOUT THIS RECORD

ID: MNEST002852
species: Zinnia violacea
miRNA family: MIR414
source: miRNEST

Taxonomy by NCBI:
Zinnia violacea Zinnia Heliantheae Heliantheae alliance Asteroideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCATCATCATCATCATCATCG

miRNA*
 ATGGGTGTTGAGGAAGATGATT

mismatches: 5
bulges: 1
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pre-miRNA
 GCGTCACAATTATCATCATCATAAACGTCTTCGTCGTCGTAGTAAGGTTGATCATCATCATCATCATCATCGGAAAGAATGGTTGATGGGTGTTGAGGAA
GATGATTGGAATTCATGGTTGCATTGAAGAATTGTGGAGAATTGAAGATGGGTTT

dot-bracket secondary structure
.....((.(((.(((((.((((((...((((((..(.((..((.((.(((((((((.((.(((...(((((((.........)))))))....))).)).
)))))))))..)).))...)))..)))))).)))))).))..))).)))..))..


SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits		UniProt no hits

RFAM no hits		most similar mature miRNAs

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
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