miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Species belonging to selected taxon:

Avena barbata, Avena sativa



ABOUT THIS RECORD

ID: MNEST044826
species: Avena sativa
source: microPC, original name: miR1439

Taxonomy by NCBI:
Avena sativa Avena Aveninae Poeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTTTGGAACGGAGGGAGTA

miRNA*
CTCCCCCCGTTTCAAAATA

mismatches: 1
bulges: 0

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pre-miRNA
TACTCCCCCCGTTTCAAAATATAAGATATTTTAGCTTTGTGAAGCAAATGTATCTAGACTACTTTTAGTATATAGGTTCACTCATGTTTAGAATGAATCT
ACACACTAAAACAAGTTTAGATACATTTTCTTTACAATCCTAACTTTATATTTTTTTGGAACGGAGGGAGTA


dot-bracket secondary structure
(((((((.(((((((((((....((((((.((((..((((((((.(((((((((((((((..(((((((.(.((((((((.((.......)).)))))))
).).)))))))..))))))))))))))).))))))))..))))....))))))))))))))))).)))))))



SIMILARITIES
miRBase no hits

PMRD no hits

microPC no hits
UniProt no hits

RFAM MIR806: 0.0006

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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