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Species belonging to selected taxon:

Agrostis stolonifera, Oryza sativa, Avena barbata, Avena sativa, Festuca arundinacea, Festuca pratensis, Hordeum vulgare, Hordeum vulgare subsp. spontaneum, Leymus cinereus x Leymus triticoides, Lolium perenne, Pseudoroegneria spicata, Triticum monococcum, Triticum turgidum subsp. durum, Brachypodium distachyon, Triticum aestivum



ABOUT THIS RECORD

ID: MNEST002786
species: Triticum monococcum
miRNA family: MIRf341
source: miRNEST

Taxonomy by NCBI:
Triticum monococcum Triticum Triticeae Pooideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTCCGTTCCTAAATATAAGCC

miRNA*
CTTATATTTAGAAATGGAGGA

mismatches: 1
bulges: 0

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pre-miRNA
CATTATACTCCCTCCGTTCCTAAATATAAGCCTTTTTAGATATTCCAATATGGACTATATACGGAGCAAAATGAGTGAATCTACACTCCAAAATATGTCT
ATATACATCCGCATGTAGTCCGTATTCAAATCTTTAAAAGGGCTTATATTTAGAAATGGAGGAAGTAGTAC


dot-bracket secondary structure
.....((((.((((((((.(((((((((((((((((((((.(((..((((((((((((((.(((((((....(((((......))))).......)))..
.......)))).))))))))))))))..))).))))))))))))))))))))).)))))))).))))....



SIMILARITIES
miRBase tae-MIR1122: 8e-34

PMRD tae-miR1122: 8e-34

microPC miR1436: 2e-19
UniProt no hits

RFAM MIR1122: 3e-49
most similar mature miRNAs

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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