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Species belonging to selected taxon:

Bombyx mori



ABOUT THIS RECORD

ID: MNEST035538
species: Bombyx mori
miRNA family: mir-124
source: miRBase, original name: bmo-mir-124 (MI0004976)

Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TAAGGCACGCGGTGAATGCCAAG

miRNA*
TCGCGTTCACTGCCGGAGCCGTTATG

mismatches: 4
bulges: 3

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pre-miRNA
CAGTCCACCTCCTCGCGTTCACTGCCGGAGCCGTTATGTATATTTAAAATTCATAAGGCACGCGGTGAATGCCAAGAGCGGACTC

dot-bracket secondary structure
.(((((..(((...(((((((((((.(..(((.(((((.............)))))))).))))))))))))...))).))))).


SIMILARITIES
miRBase ame-mir-124: 0.0000000000003

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-124: 1e-40

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
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references

[1] Tong CZ, Jin YF, Zhang YZ, J Zhejiang Univ Sci B. 7:806-816(2006)., "Computational prediction of microRNA genes in silkworm genome"




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