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Species belonging to selected taxon:

Bombyx mori



ABOUT THIS RECORD

ID: MNEST007171
species: Bombyx mori
miRNA family: mir-46
source: miRNEST

Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TGTCATGGAGTTGCTCTCTTT

miRNA*
AGAGAGCTATCCGTCGACAGT

mismatches: 2
bulges: 2

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pre-miRNA
AATCAGATATTCTGTTAATGAAGAGAGCTATCCGTCGACAGTATTGCTGATAAACACTGTCATGGAGTTGCTCTCTTTATGAACGGATGCAGGCTC

dot-bracket secondary structure
..........((((((.(((((((((((..(((((.((((((.((.......)).)))))))))))...))))))))))).)))))).........


SIMILARITIES
miRBase bmo-mir-281: 3e-38

PMRD no hits

microPC no hits
UniProt no hits

RFAM mir-281: 4e-16
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
Source sequences
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