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Species belonging to selected taxon:

Bombyx mori, Antheraea assama, Samia cynthia ricini



ABOUT THIS RECORD

ID: MNEST007141
species: Bombyx mori
miRNA family: miR-2818
source: miRNEST

Taxonomy by NCBI:
Bombyx mori Bombyx Bombycinae Bombycidae Bombyciformes Bombycoidea Obtectomera Ditrysia Heteroneura Neolepidoptera Glossata Lepidoptera Amphiesmenoptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CAAGGGAAGATATTTGTATGA

miRNA*
ATATAAAATGTCTTTCCCAGCG

mismatches: 5
bulges: 1

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pre-miRNA
GGTCGCGGGTTCGAATCCCGCCAAGGGAAGATATTTGTATGATAAATATAAAATGTCTTTCCCAGCGTTATGGATGTATATTAAA

dot-bracket secondary structure
....(((((.......)))))...((((((((((((((((.....)))).))))))))))))..(((((...)))))........


SIMILARITIES
miRBase bmo-mir-2818-1: 2e-20

PMRD no hits

microPC no hits
UniProt no hits

RFAM tRNA: 0.00000002
most similar mature miRNAs

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: not a miRNA
Source sequences
download this record





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